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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910787.1_cds_XP_016460832.1_54212
CDS Infomation

[gene=LOC107784247] [db_xref=GeneID:107784247] [protein=sn1-specific diacylglycerol lipase beta isoform X2] [protein_id=XP_016460832.1] [location=join(25416..25585,25676..25776,26664..26785,26858..26949,27894..27999,29759..29913,30738..30862,33439..33548,34337..34434,34527..34774,34924..35320,35388..35463)] [gbkey=CDS]
Sequence

ATGGTTATTATTTCTTATGTGGCTCCAGTACAATGTTTTGCTGGAGCCGAGGTCTTGAGA
TGGAGGTCTTTCTATGCAACAGAAGATAATGCATGGAAGGCACATTATAGGGAGGTATTT
GATCATGGCATTCGTGAAGCTTTGTGCTGTCTGGGACGGGTCAAATACTTGACTGTGCTA
GAGGAAGATGAAGTTTGTTCTGTGGCACAGTTACTTGGTGATCTTGTGACTTACCGTGCA
TCTGGGACAGGTCATTTGGAGCTCTTAGCAGGACTAGCTTTATTGCAGAATCCTCGTTCA
TTCTCTAAATTGTATGAAGAGTCAATGATCGTACCCATGGAAAGGATGCGCGAGGCTGCT
TTCTTTCATCCGTTTGCTGAAGCAGCCTACACGGGTCTATTACTTGATATAGGAAGAAAT
CCTGTACTTTTTTCATGTTCATGGCTCTATAGGCAAGGCATTCTTGCTCCCTGGCTATGG
AACAGGCGACCTTTACTCGAAGGTGACAACTGGTGGCGAGGTCATGCAGCAGCCTTCTTG
AAACATGTTCATTTGTCAGCACATATGCTCAGAAAAGGGCGTGTTAATCAAGGAAAGTGT
AAAGCAGCATACTTTATTGTGGTTTTGCATAATGTGAAATCTGTTGTAATTGCTGTGAGG
GGAACTGAGACCCCTGAAGACCTCATAACTGATAGTTTAGGCAGGGAATGCTGCCTTACT
GAAGGAGAATTAGATAGCCTACTACATGGCAATCATTTTGACTCGTGCATTCGTCAAAGG
GTGGTTTCATCCAAACCACACTATGCACACTCAGGAGTAGTTGAGGCCGCACGTGATCTT
TACATGCAAGTAGATGGAAATTCTGAAGATGGTGGATTTCTCTCGTCATTGCTGGGAGCA
GGATGTGAGTGTGAGGGATATGGTGTGCGAATAGTGGGGCATTCCCTTGGAGGAGCTATT
GCTGCATTACTAGGAATGAAGCTGCGCAAACAATATCCGGATATACACGTCTACACATAT
GGTGCTCTCCCATGTGTGGGTCTGGTGGTAGCAGATGCTTGTTCAGAATTCATTACCAGC
ATTGTAAACAATGATGAATTTTCAGCGCGCCTTTCAGTAGCATCAATTATGAGACTTCAA
GCAGCTGCACTTAGGGCACTATCAGAAGATGGCACTGTTGATATTACAACAATTTTTAAA
CTTGCTCATCACTTTACTTCACTGAGTGTCTGTCAGAAAAGCATGAACGATGGAGAATCG
TCAGTGAATTCTTTGACAGCAATGTCAAGTTGTACGAACGAAATCAACCATAGCCAGCTT
GAAAATGGATTGGTAAAGCACGAACCAGGATCCTCTTTTTTGCATGACATAGACACAGAT
TTTAGCTCTGATGATAAAACCGGTTCAACTAATTCATCAAATCGTTTCAACAGTCCTTTT
AATTGTTCTACTTCTGATTCAAGTCCATTTGGTGATCCTTTAGCCGAATTTATGGAGGCT
GTTCCATCTTCTGAACATAAGTCATCATTGAATATCCCAGAATTGTTTTTACCTGGTCTT
GTTATCCATATTGTGCCACAGAAGGACGGCCTTCATAAACCATTGTGGAAACGCTGGAGA
ACTTGGGAGAGAAGCTGCAGGTATAGGGCCTATGTTGCAAAAAGAGAAGCATTCAAAGAT
ATAATAGTATCGCCATACATGTTCCTGGACCATCTACCTTGGAGATGTCAGAATGCATTG
GAAAATATACTGAAGACCGGAAACGTTCAAACTCCAGATGATGCATCTGAAATTGTGTGA

Peptide Sequence

PEP ID

XP_016460832.1
PEP Infomation

PREDICTED: sn1-specific diacylglycerol lipase beta isoform X2 [Nicotiana tabacum]
Sequence

MVIISYVAPVQCFAGAEVLRWRSFYATEDNAWKAHYREVFDHGIREALCCLGRVKYLTVL
EEDEVCSVAQLLGDLVTYRASGTGHLELLAGLALLQNPRSFSKLYEESMIVPMERMREAA
FFHPFAEAAYTGLLLDIGRNPVLFSCSWLYRQGILAPWLWNRRPLLEGDNWWRGHAAAFL
KHVHLSAHMLRKGRVNQGKCKAAYFIVVLHNVKSVVIAVRGTETPEDLITDSLGRECCLT
EGELDSLLHGNHFDSCIRQRVVSSKPHYAHSGVVEAARDLYMQVDGNSEDGGFLSSLLGA
GCECEGYGVRIVGHSLGGAIAALLGMKLRKQYPDIHVYTYGALPCVGLVVADACSEFITS
IVNNDEFSARLSVASIMRLQAAALRALSEDGTVDITTIFKLAHHFTSLSVCQKSMNDGES
SVNSLTAMSSCTNEINHSQLENGLVKHEPGSSFLHDIDTDFSSDDKTGSTNSSNRFNSPF
NCSTSDSSPFGDPLAEFMEAVPSSEHKSSLNIPELFLPGLVIHIVPQKDGLHKPLWKRWR
TWERSCRYRAYVAKREAFKDIIVSPYMFLDHLPWRCQNALENILKTGNVQTPDDASEIV

Transcript Sequence

Gene sequence data has not been registered.